IL_4W4G_054

3D structure

PDB id

4W4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

4W4G|1|QA|C|1400, 4W4G|1|QA|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4W4G_054 not in the Motif Atlas

Homologous match to IL_4LFB_056

Geometric discrepancy: 0.0671

The information below is about IL_4LFB_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

4W4G|1|QA|C|1399
4W4G|1|QA|C|1400
4W4G|1|QA|G|1401
*
4W4G|1|QA|C|1501
4W4G|1|QA|A|1502
4W4G|1|QA|A|1503
4W4G|1|QA|G|1504

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QV

Transfer RNA; tRNA

Chain QX

messenger RNA