IL_4W4G_269

3D structure

PDB id

4W4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4W4G_269 not in the Motif Atlas

Homologous match to IL_4WF9_028

Geometric discrepancy: 0.0702

The information below is about IL_4WF9_028

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

4W4G|1|YA|C|837
4W4G|1|YA|C|838
*
4W4G|1|YA|G|940
4W4G|1|YA|A|941
4W4G|1|YA|G|942

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YP

50S ribosomal protein L15