IL_4W4G_282
3D structure
- PDB id
- 4W4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CCCCCAAG*CG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W4G_282 not in the Motif Atlas
- Geometric match to IL_7RQB_037
- Geometric discrepancy: 0.0804
- The information below is about IL_7RQB_037
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_15861.7
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 12
Unit IDs
4W4G|1|YA|C|1004
4W4G|1|YA|C|1005
4W4G|1|YA|C|1006
4W4G|1|YA|C|1007
4W4G|1|YA|C|1008
4W4G|1|YA|A|1009
4W4G|1|YA|A|1010
4W4G|1|YA|G|1011
*
4W4G|1|YA|C|1150
4W4G|1|YA|G|1151
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YN
- 50S ribosomal protein L13
- Chain YU
- 50S ribosomal protein L20
Coloring options: