IL_4W4G_388

3D structure

PDB id

4W4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

4W4G|1|RA|A|2126, 4W4G|1|RA|U|2167, 4W4G|1|RA|A|2169, 4W4G|1|RA|A|2170

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W4G|1|RA|G|2124
4W4G|1|RA|G|2125
4W4G|1|RA|A|2126
4W4G|1|RA|G|2127
*
4W4G|1|RA|C|2161
4W4G|1|RA|G|2162
4W4G|1|RA|C|2163
4W4G|1|RA|C|2164
4W4G|1|RA|G|2165
4W4G|1|RA|G|2166
4W4G|1|RA|U|2167
4W4G|1|RA|G|2168
4W4G|1|RA|A|2169
4W4G|1|RA|A|2170
4W4G|1|RA|A|2171
4W4G|1|RA|U|2172
4W4G|1|RA|A|2173
4W4G|1|RA|C|2174

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QW

Transfer RNA; tRNA