IL_4WC5_002

3D structure

PDB id

4WC5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tRNA-processing enzyme complex 3

Experimental method

X-RAY DIFFRACTION

Resolution

3.41 Å

Loop

Sequence

CUG*CAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CUG,CAG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WC5_002 not in the Motif Atlas

Geometric match to IL_8F4O_005

Geometric discrepancy: 0.3544

The information below is about IL_8F4O_005

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_38565.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

13

Unit IDs

4WC5|1|B|C|27
4WC5|1|B|U|28
4WC5|1|B|G|29
*
4WC5|1|B|C|41
4WC5|1|B|A|42
4WC5|1|B|G|43

Current chains

Chain B

RNA (74-MER)

Nearby chains