IL_4WC7_002

3D structure

PDB id

4WC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tRNA-processing enzyme complex 5

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUGG*CCAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CUGG,CCAG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WC7_002 not in the Motif Atlas

Geometric match to IL_6DTD_001

Geometric discrepancy: 0.2946

The information below is about IL_6DTD_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_10994.3

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

5

Unit IDs

4WC7|1|B|C|27
4WC7|1|B|U|28
4WC7|1|B|G|29
4WC7|1|B|G|30
*
4WC7|1|B|C|40
4WC7|1|B|C|41
4WC7|1|B|A|42
4WC7|1|B|G|43

Current chains

Chain B

RNA (75-MER)

Nearby chains