IL_4WCE_032

3D structure

PDB id

4WCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus

Experimental method

X-RAY DIFFRACTION

Resolution

3.53 Å

Loop

Sequence

UUU*AGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WCE_032 not in the Motif Atlas

Homologous match to IL_4WF9_034

Geometric discrepancy: 0.1219

The information below is about IL_4WF9_034

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_52767.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

4WCE|1|X|U|915
4WCE|1|X|U|916
4WCE|1|X|U|917
*
4WCE|1|X|A|950
4WCE|1|X|G|951
4WCE|1|X|A|952

Current chains

Chain X

23S rRNA

Nearby chains

Chain J

50S ribosomal protein L16

Chain S

50S ribosomal protein L25