IL_4WCE_053

3D structure

PDB id

4WCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus

Experimental method

X-RAY DIFFRACTION

Resolution

3.53 Å

Loop

Sequence

GUAGG*CACAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WCE_053 not in the Motif Atlas

Geometric match to IL_4WF9_122

Geometric discrepancy: 0.1888

The information below is about IL_4WF9_122

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_67780.1

Basepair signature

cWW-cSH-L-R-L-L-R-L

Number of instances in this motif group

1

Unit IDs

4WCE|1|X|G|1476
4WCE|1|X|U|1477
4WCE|1|X|A|1478
4WCE|1|X|G|1479
4WCE|1|X|G|1480
*
4WCE|1|X|C|1604
4WCE|1|X|A|1605
4WCE|1|X|C|1606
4WCE|1|X|A|1607
4WCE|1|X|C|1608

Current chains

Chain X

23S rRNA

Nearby chains