IL_4WCE_055

3D structure

PDB id

4WCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus

Experimental method

X-RAY DIFFRACTION

Resolution

3.53 Å

Loop

Sequence

GCGAAGCGUGCGAUUGGAUUGCACGUC*GGGAGAAGAGAGUCGUU

Length

44 nucleotides

Bulged bases

4WCE|1|X|U|1498, 4WCE|1|X|G|1591

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WCE|1|X|G|1485
4WCE|1|X|C|1486
4WCE|1|X|G|1487
4WCE|1|X|A|1488
4WCE|1|X|A|1489
4WCE|1|X|G|1490
4WCE|1|X|C|1491
4WCE|1|X|G|1492
4WCE|1|X|U|1493
4WCE|1|X|G|1494
4WCE|1|X|C|1495
4WCE|1|X|G|1496
4WCE|1|X|A|1497
4WCE|1|X|U|1498
4WCE|1|X|U|1499
4WCE|1|X|G|1500
4WCE|1|X|G|1501
4WCE|1|X|A|1502
4WCE|1|X|U|1503
4WCE|1|X|U|1504
4WCE|1|X|G|1505
4WCE|1|X|C|1506
4WCE|1|X|A|1507
4WCE|1|X|C|1508
4WCE|1|X|G|1509
4WCE|1|X|U|1510
4WCE|1|X|C|1511
*
4WCE|1|X|G|1570
4WCE|1|X|G|1571
4WCE|1|X|G|1572
4WCE|1|X|A|1573
4WCE|1|X|G|1574
4WCE|1|X|A|1575
4WCE|1|X|A|1576
4WCE|1|X|G|1577
4WCE|1|X|A|1578
4WCE|1|X|G|1591
4WCE|1|X|A|1592
4WCE|1|X|G|1593
4WCE|1|X|U|1594
4WCE|1|X|C|1595
4WCE|1|X|G|1596
4WCE|1|X|U|1597
4WCE|1|X|U|1598

Current chains

Chain X

23S rRNA

Nearby chains

Chain K

50S ribosomal protein L17