IL_4WCE_076

3D structure

PDB id

4WCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus

Experimental method

X-RAY DIFFRACTION

Resolution

3.53 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WCE_076 not in the Motif Atlas

Homologous match to IL_4WF9_075

Geometric discrepancy: 0.1534

The information below is about IL_4WF9_075

Detailed Annotation

UAA/GAN variation

Broad Annotation

UAA/GAN variation

Motif group

IL_77691.7

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

4WCE|1|X|U|1891
4WCE|1|X|U|1892
4WCE|1|X|A|1893
4WCE|1|X|G|1894
*
4WCE|1|X|C|1901
4WCE|1|X|G|1902
4WCE|1|X|A|1903
4WCE|1|X|A|1904
4WCE|1|X|G|1905

Current chains

Chain X

23S rRNA

Nearby chains