IL_4WCE_119

3D structure

PDB id

4WCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus

Experimental method

X-RAY DIFFRACTION

Resolution

3.53 Å

Loop

Sequence

CUAAG*UGAUGG

Length

11 nucleotides

Bulged bases

4WCE|1|X|G|1569

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WCE_119 not in the Motif Atlas

Homologous match to IL_4WF9_116

Geometric discrepancy: 0.1244

The information below is about IL_4WF9_116

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25186.4

Basepair signature

cWW-L-R-L-R-L-R-cWW

Number of instances in this motif group

6

Unit IDs

4WCE|1|X|C|1511
4WCE|1|X|U|1512
4WCE|1|X|A|1513
4WCE|1|X|A|1514
4WCE|1|X|G|1515
*
4WCE|1|X|U|1565
4WCE|1|X|G|1566
4WCE|1|X|A|1567
4WCE|1|X|U|1568
4WCE|1|X|G|1569
4WCE|1|X|G|1570

Current chains

Chain X

23S rRNA

Nearby chains