IL_4WF1_222

3D structure

PDB id

4WF1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to negamycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.09 Å

Loop

Sequence

GGGGAG*UCC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WF1|1|CA|G|773
4WF1|1|CA|G|774
4WF1|1|CA|G|775
4WF1|1|CA|G|776
4WF1|1|CA|A|777
4WF1|1|CA|G|778
*
4WF1|1|CA|U|804
4WF1|1|CA|C|805
4WF1|1|CA|C|806

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CK

30S ribosomal protein S11

Chain CU

30S ribosomal protein S21

Chain DA

Large subunit ribosomal RNA; LSU rRNA

Chain DC

50S ribosomal protein L2