IL_4WF1_394

3D structure

PDB id

4WF1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to negamycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.09 Å

Loop

Sequence

GUUGCCAGCG*CGGGAACUC

Length

19 nucleotides

Bulged bases

4WF1|1|CA|U|1126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WF1|1|CA|G|1124
4WF1|1|CA|U|1125
4WF1|1|CA|U|1126
4WF1|1|CA|G|1127
4WF1|1|CA|C|1128
4WF1|1|CA|C|1129
4WF1|1|CA|A|1130
4WF1|1|CA|G|1131
4WF1|1|CA|C|1132
4WF1|1|CA|G|1133
*
4WF1|1|CA|C|1141
4WF1|1|CA|G|1142
4WF1|1|CA|G|1143
4WF1|1|CA|G|1144
4WF1|1|CA|A|1145
4WF1|1|CA|A|1146
4WF1|1|CA|C|1147
4WF1|1|CA|U|1148
4WF1|1|CA|C|1149

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CI

30S ribosomal protein S9

Chain CJ

30S ribosomal protein S10