IL_4WF9_015

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

GCAC*GAGUGAAAUAGAAC

Length

18 nucleotides

Bulged bases

4WF9|1|X|U|549, 4WF9|1|X|A|553

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_81516.2

Basepair signature

cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L

Number of instances in this motif group

6

Unit IDs

4WF9|1|X|G|527
4WF9|1|X|C|528
4WF9|1|X|A|529
4WF9|1|X|C|530
*
4WF9|1|X|G|541
4WF9|1|X|A|542
4WF9|1|X|G|543
4WF9|1|X|U|544
4WF9|1|X|G|545
4WF9|1|X|A|546
4WF9|1|X|A|547
4WF9|1|X|A|548
4WF9|1|X|U|549
4WF9|1|X|A|550
4WF9|1|X|G|551
4WF9|1|X|A|552
4WF9|1|X|A|553
4WF9|1|X|C|554

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L22

Chain R

50S ribosomal protein L24