IL_4WF9_019

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

UUAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

AAA cross-strand stack

Broad Annotation

AAA cross-strand stack

Motif group

IL_66798.2

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

6

Unit IDs

4WF9|1|X|U|649
4WF9|1|X|U|650
4WF9|1|X|A|651
4WF9|1|X|A|652
4WF9|1|X|G|653
*
4WF9|1|X|U|663
4WF9|1|X|G|664
4WF9|1|X|G|665
4WF9|1|X|A|666
4WF9|1|X|G|667

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L4

Chain I

50S ribosomal protein L15