IL_4WF9_027

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

GCG*CAAUC

Length

8 nucleotides

Bulged bases

4WF9|1|X|C|821, 4WF9|1|X|A|833, 4WF9|1|X|A|834, 4WF9|1|X|U|835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_06549.2

Basepair signature

cWW-cWW

Number of instances in this motif group

6

Unit IDs

4WF9|1|X|G|820
4WF9|1|X|C|821
4WF9|1|X|G|822
*
4WF9|1|X|C|832
4WF9|1|X|A|833
4WF9|1|X|A|834
4WF9|1|X|U|835
4WF9|1|X|C|836

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain C

50S ribosomal protein L4

Chain P

50S ribosomal protein L22