IL_4WF9_036

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

4WF9|1|X|A|1200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

4WF9|1|X|C|1042
4WF9|1|X|U|1043
4WF9|1|X|A|1044
4WF9|1|X|A|1045
4WF9|1|X|G|1046
*
4WF9|1|X|C|1197
4WF9|1|X|G|1198
4WF9|1|X|A|1199
4WF9|1|X|A|1200
4WF9|1|X|G|1201

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain N

50S ribosomal protein L20

Chain O

50S ribosomal protein L21

Chain W

50S ribosomal protein L30

Chain Y

5S ribosomal RNA; 5S rRNA