IL_4WF9_040
3D structure
- PDB id
- 4WF9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.43 Å
Loop
- Sequence
- GGAAAAG*CGAAAAUGUACCGGGGC
- Length
- 24 nucleotides
- Bulged bases
- 4WF9|1|X|A|1171, 4WF9|1|X|U|1174, 4WF9|1|X|C|1178
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.3
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
4WF9|1|X|G|1068
4WF9|1|X|G|1069
4WF9|1|X|A|1070
4WF9|1|X|A|1071
4WF9|1|X|A|1072
4WF9|1|X|A|1073
4WF9|1|X|G|1074
*
4WF9|1|X|C|1168
4WF9|1|X|G|1169
4WF9|1|X|A|1170
4WF9|1|X|A|1171
4WF9|1|X|A|1172
4WF9|1|X|A|1173
4WF9|1|X|U|1174
4WF9|1|X|G|1175
4WF9|1|X|U|1176
4WF9|1|X|A|1177
4WF9|1|X|C|1178
4WF9|1|X|C|1179
4WF9|1|X|G|1180
4WF9|1|X|G|1181
4WF9|1|X|G|1182
4WF9|1|X|G|1183
4WF9|1|X|C|1184
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L3
- Chain G
- 50S ribosomal protein L13
- Chain J
- 50S ribosomal protein L16
- Chain Y
- 5S ribosomal RNA; 5S rRNA
Coloring options: