Loop IL_4WF9

3D structure

PDB id: 4WF9 (explore in PDB, NAKB, or RNA 3D Hub)
Description: The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin
Experimental method: X-RAY DIFFRACTION
Resolution: 3.43 Å

Loop

Sequence: AUAGGCGAAGCGUGCGAUUGGAUUGCACGUC*GGGAGAAGAAGUCGUUGAUUU
Length: 52 nucleotides
Bulged bases: 4WF9|1|X|A|1489, 4WF9|1|X|A|1497, 4WF9|1|X|U|1498, 4WF9|1|X|U|1503
QA status: Missing nucleotides

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4WF9|1|X|A|1481
4WF9|1|X|U|1482
4WF9|1|X|A|1483
4WF9|1|X|G|1484
4WF9|1|X|G|1485
4WF9|1|X|C|1486
4WF9|1|X|G|1487
4WF9|1|X|A|1488
4WF9|1|X|A|1489
4WF9|1|X|G|1490
4WF9|1|X|C|1491
4WF9|1|X|G|1492
4WF9|1|X|U|1493
4WF9|1|X|G|1494
4WF9|1|X|C|1495
4WF9|1|X|G|1496
4WF9|1|X|A|1497
4WF9|1|X|U|1498
4WF9|1|X|U|1499
4WF9|1|X|G|1500
4WF9|1|X|G|1501
4WF9|1|X|A|1502
4WF9|1|X|U|1503
4WF9|1|X|U|1504
4WF9|1|X|G|1505
4WF9|1|X|C|1506
4WF9|1|X|A|1507
4WF9|1|X|C|1508
4WF9|1|X|G|1509
4WF9|1|X|U|1510
4WF9|1|X|C|1511
*
4WF9|1|X|G|1570
4WF9|1|X|G|1571
4WF9|1|X|G|1572
4WF9|1|X|A|1573
4WF9|1|X|G|1574
4WF9|1|X|A|1575
4WF9|1|X|A|1576
4WF9|1|X|G|1577
4WF9|1|X|A|1578
4WF9|1|X|A|1592
4WF9|1|X|G|1593
4WF9|1|X|U|1594
4WF9|1|X|C|1595
4WF9|1|X|G|1596
4WF9|1|X|U|1597
4WF9|1|X|U|1598
4WF9|1|X|G|1599
4WF9|1|X|A|1600
4WF9|1|X|U|1601
4WF9|1|X|U|1602
4WF9|1|X|U|1603

Current chains

Chain X: 23S ribosomal RNA

Nearby chains

Chain K: 50S ribosomal protein L17

IL_4WF9_057