IL_4WF9_077

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

CGAAAUUCCUUG*CCCG

Length

16 nucleotides

Bulged bases

4WF9|1|X|A|1965, 4WF9|1|X|U|1971, 4WF9|1|X|C|1990

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42218.1

Basepair signature

cWW-L-R-cHW-cWW-L-L-tSW-L

Number of instances in this motif group

4

Unit IDs

4WF9|1|X|C|1961
4WF9|1|X|G|1962
4WF9|1|X|A|1963
4WF9|1|X|A|1964
4WF9|1|X|A|1965
4WF9|1|X|U|1966
4WF9|1|X|U|1967
4WF9|1|X|C|1968
4WF9|1|X|C|1969
4WF9|1|X|U|1970
4WF9|1|X|U|1971
4WF9|1|X|G|1972
*
4WF9|1|X|C|1988
4WF9|1|X|C|1989
4WF9|1|X|C|1990
4WF9|1|X|G|1991

Current chains

Chain X

23S ribosomal RNA

Nearby chains