IL_4WF9_097

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

UG*CAAG

Length

6 nucleotides

Bulged bases

4WF9|1|X|A|2569

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Major groove platform with intercalation

Broad Annotation

Major groove platform

Motif group

IL_95601.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

9

Unit IDs

4WF9|1|X|U|2549
4WF9|1|X|G|2550
*
4WF9|1|X|C|2567
4WF9|1|X|A|2568
4WF9|1|X|A|2569
4WF9|1|X|G|2570

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain G

50S ribosomal protein L13