IL_4WF9_104

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

GAUAAG*UGAAGC

Length

12 nucleotides

Bulged bases

4WF9|1|X|A|2792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.8

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

6

Unit IDs

4WF9|1|X|G|2764
4WF9|1|X|A|2765
4WF9|1|X|U|2766
4WF9|1|X|A|2767
4WF9|1|X|A|2768
4WF9|1|X|G|2769
*
4WF9|1|X|U|2789
4WF9|1|X|G|2790
4WF9|1|X|A|2791
4WF9|1|X|A|2792
4WF9|1|X|G|2793
4WF9|1|X|C|2794

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L6

Chain G

50S ribosomal protein L13