IL_4WF9_123

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

UAGGG*CCCAG

Length

10 nucleotides

Bulged bases

4WF9|1|X|A|1771

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Partly complementary

Broad Annotation

Partly complementary

Motif group

IL_49751.4

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

4WF9|1|X|U|1757
4WF9|1|X|A|1758
4WF9|1|X|G|1759
4WF9|1|X|G|1760
4WF9|1|X|G|1761
*
4WF9|1|X|C|1768
4WF9|1|X|C|1769
4WF9|1|X|C|1770
4WF9|1|X|A|1771
4WF9|1|X|G|1772

Current chains

Chain X

23S ribosomal RNA

Nearby chains