IL_4WFA_056

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

GUAGG*CACAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WFA_056 not in the Motif Atlas

Homologous match to IL_4WF9_122

Geometric discrepancy: 0.2077

The information below is about IL_4WF9_122

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_67780.1

Basepair signature

cWW-cSH-L-R-L-L-R-L

Number of instances in this motif group

1

Unit IDs

4WFA|1|X|G|1476
4WFA|1|X|U|1477
4WFA|1|X|A|1478
4WFA|1|X|G|1479
4WFA|1|X|G|1480
*
4WFA|1|X|C|1604
4WFA|1|X|A|1605
4WFA|1|X|C|1606
4WFA|1|X|A|1607
4WFA|1|X|C|1608

Current chains

Chain X

23S rRNA

Nearby chains