Loop IL_4WFA

3D structure

PDB id: 4WFA (explore in PDB, NAKB, or RNA 3D Hub)
Description: The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid
Experimental method: X-RAY DIFFRACTION
Resolution: 3.39 Å

Loop

Sequence: GCGAGCGUGCGAUUGGAUGCACGUCUAAGC*GUGAUGGGGAGAAGAGAGUCGUU
Length: 53 nucleotides
Bulged bases: 4WFA|1|X|A|1497, 4WFA|1|X|U|1498, 4WFA|1|X|G|1569, 4WFA|1|X|G|1591
QA status: Missing nucleotides

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4WFA|1|X|G|1485
4WFA|1|X|C|1486
4WFA|1|X|G|1487
4WFA|1|X|A|1488
4WFA|1|X|G|1490
4WFA|1|X|C|1491
4WFA|1|X|G|1492
4WFA|1|X|U|1493
4WFA|1|X|G|1494
4WFA|1|X|C|1495
4WFA|1|X|G|1496
4WFA|1|X|A|1497
4WFA|1|X|U|1498
4WFA|1|X|U|1499
4WFA|1|X|G|1500
4WFA|1|X|G|1501
4WFA|1|X|A|1502
4WFA|1|X|U|1504
4WFA|1|X|G|1505
4WFA|1|X|C|1506
4WFA|1|X|A|1507
4WFA|1|X|C|1508
4WFA|1|X|G|1509
4WFA|1|X|U|1510
4WFA|1|X|C|1511
4WFA|1|X|U|1512
4WFA|1|X|A|1513
4WFA|1|X|A|1514
4WFA|1|X|G|1515
4WFA|1|X|C|1516
*
4WFA|1|X|G|1564
4WFA|1|X|U|1565
4WFA|1|X|G|1566
4WFA|1|X|A|1567
4WFA|1|X|U|1568
4WFA|1|X|G|1569
4WFA|1|X|G|1570
4WFA|1|X|G|1571
4WFA|1|X|G|1572
4WFA|1|X|A|1573
4WFA|1|X|G|1574
4WFA|1|X|A|1575
4WFA|1|X|A|1576
4WFA|1|X|G|1577
4WFA|1|X|A|1578
4WFA|1|X|G|1591
4WFA|1|X|A|1592
4WFA|1|X|G|1593
4WFA|1|X|U|1594
4WFA|1|X|C|1595
4WFA|1|X|G|1596
4WFA|1|X|U|1597
4WFA|1|X|U|1598

Current chains

Chain X: 23S rRNA

Nearby chains

Chain K: 50S ribosomal protein L17

IL_4WFA_058