IL_4WFA_059

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

CAGUAGG*CUGAGCUG

Length

15 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WFA_059 not in the Motif Atlas

Homologous match to IL_4WF9_059

Geometric discrepancy: 0.112

The information below is about IL_4WF9_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WFA|1|X|C|1516
4WFA|1|X|A|1517
4WFA|1|X|G|1518
4WFA|1|X|U|1519
4WFA|1|X|A|1521
4WFA|1|X|G|1522
4WFA|1|X|G|1523
*
4WFA|1|X|C|1557
4WFA|1|X|U|1558
4WFA|1|X|G|1559
4WFA|1|X|A|1560
4WFA|1|X|G|1561
4WFA|1|X|C|1562
4WFA|1|X|U|1563
4WFA|1|X|G|1564

Current chains

Chain X

23S rRNA

Nearby chains