IL_4WFA_066

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

UUAGGG*CCCAGA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WFA_066 not in the Motif Atlas

Geometric match to IL_4WF9_067

Geometric discrepancy: 0.2579

The information below is about IL_4WF9_067

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65969.3

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

4WFA|1|X|U|1756
4WFA|1|X|U|1757
4WFA|1|X|A|1758
4WFA|1|X|G|1759
4WFA|1|X|G|1760
4WFA|1|X|G|1761
*
4WFA|1|X|C|1768
4WFA|1|X|C|1769
4WFA|1|X|C|1770
4WFA|1|X|A|1771
4WFA|1|X|G|1772
4WFA|1|X|A|1773

Current chains

Chain X

23S rRNA

Nearby chains