IL_4WFB_019
3D structure
- PDB id
- 4WFB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.43 Å
Loop
- Sequence
- GAAAC*GAGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 4WFB|1|X|G|846, 4WFB|1|X|G|850
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WFB_019 not in the Motif Atlas
- Homologous match to IL_4WF9_021
- Geometric discrepancy: 0.0552
- The information below is about IL_4WF9_021
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
4WFB|1|X|G|719
4WFB|1|X|A|720
4WFB|1|X|A|721
4WFB|1|X|A|722
4WFB|1|X|C|723
*
4WFB|1|X|G|844
4WFB|1|X|A|845
4WFB|1|X|G|846
4WFB|1|X|A|847
4WFB|1|X|U|848
4WFB|1|X|A|849
4WFB|1|X|G|850
4WFB|1|X|C|851
Current chains
- Chain X
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L4
- Chain I
- 50S ribosomal protein L15
Coloring options: