Loop IL_4WFB

3D structure

PDB id: 4WFB (explore in PDB, NAKB, or RNA 3D Hub)
Description: The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205
Experimental method: X-RAY DIFFRACTION
Resolution: 3.43 Å

Loop

Sequence: GCGAGCGUGCGAUUGGAUGCACGUCUAAGC*GUGAUGGGAGAAGAAGUCGUU
Length: 51 nucleotides
Bulged bases: 4WFB|1|X|A|1497, 4WFB|1|X|U|1498, 4WFB|1|X|A|1592
QA status: Missing nucleotides

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4WFB|1|X|G|1485
4WFB|1|X|C|1486
4WFB|1|X|G|1487
4WFB|1|X|A|1488
4WFB|1|X|G|1490
4WFB|1|X|C|1491
4WFB|1|X|G|1492
4WFB|1|X|U|1493
4WFB|1|X|G|1494
4WFB|1|X|C|1495
4WFB|1|X|G|1496
4WFB|1|X|A|1497
4WFB|1|X|U|1498
4WFB|1|X|U|1499
4WFB|1|X|G|1500
4WFB|1|X|G|1501
4WFB|1|X|A|1502
4WFB|1|X|U|1504
4WFB|1|X|G|1505
4WFB|1|X|C|1506
4WFB|1|X|A|1507
4WFB|1|X|C|1508
4WFB|1|X|G|1509
4WFB|1|X|U|1510
4WFB|1|X|C|1511
4WFB|1|X|U|1512
4WFB|1|X|A|1513
4WFB|1|X|A|1514
4WFB|1|X|G|1515
4WFB|1|X|C|1516
*
4WFB|1|X|G|1564
4WFB|1|X|U|1565
4WFB|1|X|G|1566
4WFB|1|X|A|1567
4WFB|1|X|U|1568
4WFB|1|X|G|1570
4WFB|1|X|G|1571
4WFB|1|X|G|1572
4WFB|1|X|A|1573
4WFB|1|X|G|1574
4WFB|1|X|A|1575
4WFB|1|X|A|1576
4WFB|1|X|G|1577
4WFB|1|X|A|1578
4WFB|1|X|A|1592
4WFB|1|X|G|1593
4WFB|1|X|U|1594
4WFB|1|X|C|1595
4WFB|1|X|G|1596
4WFB|1|X|U|1597
4WFB|1|X|U|1598

Current chains

Chain X: 23S rRNA

Nearby chains

Chain K: 50S ribosomal protein L17

IL_4WFB_053