IL_4WFB_062

3D structure

PDB id

4WFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

UUUAGGG*CCCAGAA

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WFB_062 not in the Motif Atlas

Homologous match to IL_4WF9_118

Geometric discrepancy: 0.2477

The information below is about IL_4WF9_118

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WFB|1|X|U|1755
4WFB|1|X|U|1756
4WFB|1|X|U|1757
4WFB|1|X|A|1758
4WFB|1|X|G|1759
4WFB|1|X|G|1760
4WFB|1|X|G|1761
*
4WFB|1|X|C|1768
4WFB|1|X|C|1769
4WFB|1|X|C|1770
4WFB|1|X|A|1771
4WFB|1|X|G|1772
4WFB|1|X|A|1773
4WFB|1|X|A|1774

Current chains

Chain X

23S rRNA

Nearby chains