IL_4WOI_024
3D structure
- PDB id
- 4WOI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGAAGAAG*UGUAAAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WOI_024 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.1443
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28026.3
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
4WOI|1|AA|U|409
4WOI|1|AA|G|410
4WOI|1|AA|A|411
4WOI|1|AA|A|412
4WOI|1|AA|G|413
4WOI|1|AA|A|414
4WOI|1|AA|A|415
4WOI|1|AA|G|416
*
4WOI|1|AA|U|427
4WOI|1|AA|G|428
4WOI|1|AA|U|429
4WOI|1|AA|A|430
4WOI|1|AA|A|431
4WOI|1|AA|A|432
4WOI|1|AA|G|433
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AD
- 30S ribosomal protein S4
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