IL_4WOI_062

3D structure

PDB id

4WOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGGAUUG*CAUGAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WOI|1|AA|C|1303
4WOI|1|AA|G|1304
4WOI|1|AA|G|1305
4WOI|1|AA|A|1306
4WOI|1|AA|U|1307
4WOI|1|AA|U|1308
4WOI|1|AA|G|1309
*
4WOI|1|AA|C|1328
4WOI|1|AA|A|1329
4WOI|1|AA|U|1330
4WOI|1|AA|G|1331
4WOI|1|AA|A|1332
4WOI|1|AA|A|1333
4WOI|1|AA|G|1334

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AM

30S ribosomal protein S13

Chain AS

30S ribosomal protein S19

Chain BF

50S ribosomal protein L5