IL_4WOI_111

3D structure

PDB id

4WOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAG*CAC

Length

36 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WOI|1|BA|G|1055
4WOI|1|BA|G|1056
4WOI|1|BA|A|1057
4WOI|1|BA|U|1058
4WOI|1|BA|G|1059
4WOI|1|BA|U|1060
4WOI|1|BA|U|1061
4WOI|1|BA|G|1062
4WOI|1|BA|G|1063
4WOI|1|BA|C|1064
4WOI|1|BA|U|1065
4WOI|1|BA|U|1066
4WOI|1|BA|A|1067
4WOI|1|BA|G|1068
4WOI|1|BA|A|1069
4WOI|1|BA|A|1070
4WOI|1|BA|G|1071
4WOI|1|BA|C|1072
4WOI|1|BA|A|1073
4WOI|1|BA|G|1074
4WOI|1|BA|C|1075
4WOI|1|BA|C|1076
4WOI|1|BA|A|1077
4WOI|1|BA|U|1078
4WOI|1|BA|C|1079
4WOI|1|BA|A|1080
4WOI|1|BA|U|1081
4WOI|1|BA|U|1082
4WOI|1|BA|U|1083
4WOI|1|BA|A|1084
4WOI|1|BA|A|1085
4WOI|1|BA|A|1086
4WOI|1|BA|G|1087
*
4WOI|1|BA|C|1102
4WOI|1|BA|A|1103
4WOI|1|BA|C|1104

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BI

50S ribosomal protein L11