IL_4WOI_159

3D structure

PDB id

4WOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUAC*GUGUUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WOI|1|BA|A|2459
4WOI|1|BA|U|2460
4WOI|1|BA|A|2461
4WOI|1|BA|C|2462
*
4WOI|1|BA|G|2488
4WOI|1|BA|U|2489
4WOI|1|BA|G|2490
4WOI|1|BA|U|2491
4WOI|1|BA|U|2492
4WOI|1|BA|U|2493

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AV

Ribosome-recycling factor

Chain BM

50S ribosomal protein L16