IL_4WOI_237

3D structure

PDB id

4WOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGAAG*CCUGCU

Length

11 nucleotides

Bulged bases

4WOI|1|CA|U|1559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WOI|1|CA|A|1431
4WOI|1|CA|G|1432
4WOI|1|CA|A|1433
4WOI|1|CA|A|1434
4WOI|1|CA|G|1435
*
4WOI|1|CA|C|1557
4WOI|1|CA|C|1558
4WOI|1|CA|U|1559
4WOI|1|CA|G|1560
4WOI|1|CA|C|1561
4WOI|1|CA|U|1562

Current chains

Chain CA

23S ribosomal RNA

Nearby chains

Chain CC

50S ribosomal protein L2