IL_4WOI_290

3D structure

PDB id

4WOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGAUAAG*CGAAACU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WOI|1|CA|A|2736
4WOI|1|CA|G|2737
4WOI|1|CA|A|2738
4WOI|1|CA|U|2739
4WOI|1|CA|A|2740
4WOI|1|CA|A|2741
4WOI|1|CA|G|2742
*
4WOI|1|CA|C|2762
4WOI|1|CA|G|2763
4WOI|1|CA|A|2764
4WOI|1|CA|A|2765
4WOI|1|CA|A|2766
4WOI|1|CA|C|2767
4WOI|1|CA|U|2768

Current chains

Chain CA

23S ribosomal RNA

Nearby chains

Chain C4

50S ribosomal protein L36

Chain CG

50S ribosomal protein L6

Chain CJ

50S ribosomal protein L13