IL_4WOI_302
3D structure
- PDB id
- 4WOI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CCUAAC*GGG
- Length
- 9 nucleotides
- Bulged bases
- 4WOI|1|DA|C|48, 4WOI|1|DA|A|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WOI_302 not in the Motif Atlas
- Homologous match to IL_5J7L_003
- Geometric discrepancy: 0.1194
- The information below is about IL_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14177.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4WOI|1|DA|C|47
4WOI|1|DA|C|48
4WOI|1|DA|U|49
4WOI|1|DA|A|50
4WOI|1|DA|A|51
4WOI|1|DA|C|52
*
4WOI|1|DA|G|359
4WOI|1|DA|G|360
4WOI|1|DA|G|361
Current chains
- Chain DA
- 16S ribosomal RNA
Nearby chains
- Chain BH
- 50S ribosomal protein L9
- Chain DL
- 30S ribosomal protein S12
Coloring options: