IL_4WPO_079
3D structure
- PDB id
- 4WPO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- ACGA*UCUAU
- Length
- 9 nucleotides
- Bulged bases
- 4WPO|1|AA|C|2077, 4WPO|1|AA|C|2624, 4WPO|1|AA|U|2625, 4WPO|1|AA|A|2626
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WPO_079 not in the Motif Atlas
- Homologous match to IL_9DFE_079
- Geometric discrepancy: 0.0595
- The information below is about IL_9DFE_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70335.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4WPO|1|AA|A|2076
4WPO|1|AA|C|2077
4WPO|1|AA|G|2078
4WPO|1|AA|A|2079
*
4WPO|1|AA|U|2623
4WPO|1|AA|C|2624
4WPO|1|AA|U|2625
4WPO|1|AA|A|2626
4WPO|1|AA|U|2627
Current chains
- Chain AA
- 23S Ribosomal RNA
Nearby chains
- Chain A5
- 50S ribosomal protein L32
- Chain AE
- 50S ribosomal protein L3
- Chain AW
- 50S ribosomal protein L22
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