IL_4WPO_172
3D structure
- PDB id
- 4WPO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WPO_172 not in the Motif Atlas
- Geometric match to IL_5VCI_002
- Geometric discrepancy: 0.1407
- The information below is about IL_5VCI_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 174
Unit IDs
4WPO|1|BA|G|1405
4WPO|1|BA|U|1406
4WPO|1|BA|C|1407
*
4WPO|1|BA|G|1494
4WPO|1|BA|U|1495
4WPO|1|BA|C|1496
Current chains
- Chain BA
- 16S Ribosomal RNA
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BL
- 30S ribosomal protein S12
- Chain BM
- 30S ribosomal protein S13
- Chain BV
- mRNA
- Chain BW
- Transfer RNA; tRNA
- Chain BX
- Transfer RNA; tRNA
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