IL_4WPO_179

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGA*UCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GGA,UCC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WPO_179 not in the Motif Atlas

Homologous match to IL_4WSM_380

Geometric discrepancy: 0.3023

The information below is about IL_4WSM_380

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WPO|1|BW|G|5
4WPO|1|BW|G|6
4WPO|1|BW|A|7
*
4WPO|1|BW|U|66
4WPO|1|BW|C|67
4WPO|1|BW|C|68

Current chains

Chain BW

A-site tRNA

Nearby chains

Chain BX

Transfer RNA; tRNA

Chain BZ

50S ribosomal protein L9,Elongation factor G