IL_4WPO_330

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

4WPO|1|DA|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WPO_330 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.078

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

60

Unit IDs

4WPO|1|DA|G|925
4WPO|1|DA|G|926
4WPO|1|DA|G|927
*
4WPO|1|DA|U|1390
4WPO|1|DA|U|1391

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains

Chain DV

mRNA