IL_4WPO_358

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGG*CCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CGG,CCG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WPO_358 not in the Motif Atlas

Homologous match to IL_4WT8_349

Geometric discrepancy: 0.264

The information below is about IL_4WT8_349

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WPO|1|DY|C|4
4WPO|1|DY|G|5
4WPO|1|DY|G|6
*
4WPO|1|DY|C|67
4WPO|1|DY|C|68
4WPO|1|DY|G|69

Current chains

Chain DY

E-site tRNA

Nearby chains

Chain C6

50S ribosomal protein L33

Chain CA

Large subunit ribosomal RNA; LSU rRNA