IL_4WQ1_206

3D structure

PDB id

4WQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGU*ACCC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQ1_206 not in the Motif Atlas

Geometric match to IL_4V9F_072

Geometric discrepancy: 0.3359

The information below is about IL_4V9F_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75527.1

Basepair signature

cWW-cWW-cSH-cWW

Number of instances in this motif group

10

Unit IDs

4WQ1|1|1G|G|657
4WQ1|1|1G|G|658
4WQ1|1|1G|U|659
*
4WQ1|1|1G|A|746
4WQ1|1|1G|C|747
4WQ1|1|1G|C|748
4WQ1|1|1G|C|749

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 6A

30S ribosomal protein S15