IL_4WQ1_270
3D structure
- PDB id
- 4WQ1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GCUAG*CAAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WQ1_270 not in the Motif Atlas
- Homologous match to IL_5J7L_274
- Geometric discrepancy: 0.3205
- The information below is about IL_5J7L_274
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
4WQ1|1|1H|G|875
4WQ1|1|1H|C|876
4WQ1|1|1H|U|877
4WQ1|1|1H|A|878
4WQ1|1|1H|G|879
*
4WQ1|1|1H|C|898
4WQ1|1|1H|A|899
4WQ1|1|1H|A|900
4WQ1|1|1H|A|901
4WQ1|1|1H|C|902
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 1K
- Transfer RNA; tRNA
- Chain 88
- 50S ribosomal protein L16
- Chain H8
- 50S ribosomal protein L25
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