IL_4WQF_283

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CG*CACG

Length

6 nucleotides

Bulged bases

4WQF|1|CA|A|2572, 4WQF|1|CA|C|2573

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQF_283 not in the Motif Atlas

Homologous match to IL_7RQB_098

Geometric discrepancy: 0.0776

The information below is about IL_7RQB_098

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_71530.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

4WQF|1|CA|C|2512
4WQF|1|CA|G|2513
*
4WQF|1|CA|C|2571
4WQF|1|CA|A|2572
4WQF|1|CA|C|2573
4WQF|1|CA|G|2574

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C0

50S ribosomal protein L27

Chain CE

50S ribosomal protein L3

Chain CN

50S ribosomal protein L13