3D structure

PDB id
4WQF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state
Experimental method
X-RAY DIFFRACTION
Resolution
2.8 Å

Loop

Sequence
CGUGCCAG*CGGUAAUACG
Length
18 nucleotides
Bulged bases
4WQF|1|DA|A|532, 4WQF|1|DA|U|534, 4WQF|1|DA|A|535
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4WQF|1|DA|C|514
4WQF|1|DA|G|515
4WQF|1|DA|U|516
4WQF|1|DA|G|517
4WQF|1|DA|C|518
4WQF|1|DA|C|519
4WQF|1|DA|A|520
4WQF|1|DA|G|521
*
4WQF|1|DA|C|528
4WQF|1|DA|G|529
4WQF|1|DA|G|530
4WQF|1|DA|U|531
4WQF|1|DA|A|532
4WQF|1|DA|A|533
4WQF|1|DA|U|534
4WQF|1|DA|A|535
4WQF|1|DA|C|536
4WQF|1|DA|G|537

Current chains

Chain DA
16S Ribosomal RNA

Nearby chains

Chain DC
30S ribosomal protein S3
Chain DD
30S ribosomal protein S4
Chain DL
30S ribosomal protein S12
Chain DZ
50S ribosomal protein L9,Elongation factor G

Coloring options:

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