IL_4WQF_377

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CCU*GG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQF_377 not in the Motif Atlas

Geometric match to IL_5TBW_070

Geometric discrepancy: 0.2585

The information below is about IL_5TBW_070

Detailed Annotation

Single stack bend

Broad Annotation

Single stack bend

Motif group

IL_05035.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

38

Unit IDs

4WQF|1|BA|C|341
4WQF|1|BA|C|342
4WQF|1|BA|U|343
*
4WQF|1|BA|G|347
4WQF|1|BA|G|348

Current chains

Chain BA

16S Ribosomal RNA

Nearby chains

Chain AO

50S ribosomal protein L14

Chain AT

50S ribosomal protein L19

Chain BZ

50S ribosomal protein L9,Elongation factor G