IL_4WQF_380

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGGG*CUU

Length

7 nucleotides

Bulged bases

4WQF|1|BA|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQF_380 not in the Motif Atlas

Geometric match to IL_6IA2_002

Geometric discrepancy: 0.1639

The information below is about IL_6IA2_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

4WQF|1|BA|G|925
4WQF|1|BA|G|926
4WQF|1|BA|G|927
4WQF|1|BA|G|928
*
4WQF|1|BA|C|1389
4WQF|1|BA|U|1390
4WQF|1|BA|U|1391

Current chains

Chain BA

16S Ribosomal RNA

Nearby chains

Chain BV

mRNA