IL_4WQF_389

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAGCCUGUGAACC*GGGGAGGCGCCGGUGAAAUAC

Length

35 nucleotides

Bulged bases

4WQF|1|CA|U|2132, 4WQF|1|CA|C|2164, 4WQF|1|CA|G|2168

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQF|1|CA|G|2124
4WQF|1|CA|G|2125
4WQF|1|CA|A|2126
4WQF|1|CA|G|2127
4WQF|1|CA|C|2128
4WQF|1|CA|C|2129
4WQF|1|CA|U|2130
4WQF|1|CA|G|2131
4WQF|1|CA|U|2132
4WQF|1|CA|G|2133
4WQF|1|CA|A|2134
4WQF|1|CA|A|2135
4WQF|1|CA|C|2136
4WQF|1|CA|C|2137
*
4WQF|1|CA|G|2154
4WQF|1|CA|G|2155
4WQF|1|CA|G|2156
4WQF|1|CA|G|2157
4WQF|1|CA|A|2158
4WQF|1|CA|G|2159
4WQF|1|CA|G|2160
4WQF|1|CA|C|2161
4WQF|1|CA|G|2162
4WQF|1|CA|C|2163
4WQF|1|CA|C|2164
4WQF|1|CA|G|2165
4WQF|1|CA|G|2166
4WQF|1|CA|U|2167
4WQF|1|CA|G|2168
4WQF|1|CA|A|2169
4WQF|1|CA|A|2170
4WQF|1|CA|A|2171
4WQF|1|CA|U|2172
4WQF|1|CA|A|2173
4WQF|1|CA|C|2174

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CC

50S ribosomal protein L1

Chain DY

Transfer RNA; tRNA