IL_4WQF_397
3D structure
- PDB id
- 4WQF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GCCAC*GGAGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WQF_397 not in the Motif Atlas
- Homologous match to IL_5J7L_056
- Geometric discrepancy: 0.4554
- The information below is about IL_5J7L_056
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
4WQF|1|DA|G|1258
4WQF|1|DA|C|1259
4WQF|1|DA|C|1260
4WQF|1|DA|A|1261
4WQF|1|DA|C|1262
*
4WQF|1|DA|G|1273
4WQF|1|DA|G|1274
4WQF|1|DA|A|1275
4WQF|1|DA|G|1276
4WQF|1|DA|C|1277
Current chains
- Chain DA
- 16S Ribosomal RNA
Nearby chains
- Chain DC
- 30S ribosomal protein S3
- Chain DN
- 30S ribosomal protein S14 type Z
- Chain DS
- 30S ribosomal protein S19
- Chain DU
- 30S ribosomal protein Thx
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